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java.lang.Objectcore.Identifier
core.Tree
public class Tree
Identification identax.core extension using dichotomical trees It generates the tree with the minimum number of tests requiered
Field Summary | |
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TreeNode |
root
Root node of the tree |
Fields inherited from class core.Identifier |
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cnf, con, mat, sum |
Constructor Summary | |
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Tree(Context con,
Matrix mat,
Configuration cnf)
Creates a new Tree Identifier with no done tests |
Method Summary | |
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private TreeNode |
recursiveTree(Context con)
Recursive method to populate tree |
void |
run()
Populates the tree nodes with test and taxa, updating every node. |
Methods inherited from class core.Identifier |
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getBestTaxaIndex, getBestTestIndex, getBestTestIndex, getBestTestIndex, getBestTestIndex, getTaxaIndex, getTestIndex, getTestIndex, getTestIndex, getTestIndex, isSeparator, normTaxaProb |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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public TreeNode root
Constructor Detail |
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public Tree(Context con, Matrix mat, Configuration cnf)
con
- Context of the executionmat
- Reference matrixMethod Detail |
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public void run() throws java.lang.Exception
java.lang.Exception
- if there is any error during the runtimeprivate TreeNode recursiveTree(Context con) throws java.lang.Exception
con
- node Context
java.lang.Exception
- if there is any error during the runtime
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