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I

id - Variable in class gui.workSpace.WorkspaceManager
 
Identax - Class in <Unnamed>
Main Class
Identax() - Constructor for class Identax
 
IDENTAX_VERSION - Static variable in class gui.MainFrame
 
Identifier - Class in core
Abstract class Identifier contains common methods for concrete implementations of identifications cores, like Tree or Bayes.
Identifier(Context, Matrix, Configuration) - Constructor for class core.Identifier
Creates a new Identifier with no done tests
idTree - Variable in class gui.matrixLibrary.DialogTree
 
idTree - Variable in class gui.matrixLibrary.DialogTree.MenuTree
 
importDate - Variable in class data.Matrix
Timestamp of the import moment
Importer - Class in data.importers
Data layer manager to import external files.
Importer() - Constructor for class data.importers.Importer
 
ImporterCSV - Class in data.importers
Importer for .CSV (comma separated values) files.
ImporterCSV() - Constructor for class data.importers.ImporterCSV
 
ImporterCSV.MatrixFileFilterCSV - Class in data.importers
A kind of FileFilter that accept .CSV filetypes
ImporterCSV.MatrixFileFilterCSV() - Constructor for class data.importers.ImporterCSV.MatrixFileFilterCSV
 
ImporterIMAT - Class in data.importers
Handler for .IMAT (this program) files.
ImporterIMAT() - Constructor for class data.importers.ImporterIMAT
 
ImporterIMAT.MatrixFileFilterIMAT - Class in data.importers
A kind of FileFilter that accept .IMAT filetypes
ImporterIMAT.MatrixFileFilterIMAT() - Constructor for class data.importers.ImporterIMAT.MatrixFileFilterIMAT
 
ImporterMAT - Class in data.importers
Handler for import .MAT (old Bacterial Identifier) files.
ImporterMAT() - Constructor for class data.importers.ImporterMAT
 
ImporterMAT.MatrixFileFilterMAT - Class in data.importers
A kind of FileFilter that accept .MAT filetypes
ImporterMAT.MatrixFileFilterMAT() - Constructor for class data.importers.ImporterMAT.MatrixFileFilterMAT
 
ImporterXLS - Class in data.importers
Importer for .XLS (excel 97-2003) files.
ImporterXLS() - Constructor for class data.importers.ImporterXLS
 
ImporterXLS.MatrixFileFilterXLS - Class in data.importers
A kind of FileFilter that accept .XLS filetypes
ImporterXLS.MatrixFileFilterXLS() - Constructor for class data.importers.ImporterXLS.MatrixFileFilterXLS
 
importFile(File) - Static method in class data.importers.ImporterCSV
Parses the data and put it in the new Matrix object
importFile(File) - Static method in class data.importers.ImporterIMAT
Parses the data and put it in the new Matrix object
importFile(File) - Static method in class data.importers.ImporterMAT
Parses the data and put it in the new Matrix object
importFile(File) - Static method in class data.importers.ImporterXLS
Parses the data and put it in the new Matrix object
importMatrix(File) - Static method in class data.importers.Importer
This function reads the given file and parse the data in it if applicable.
ImportMatrixManager - Class in gui.matrixLibrary
 
ImportMatrixManager() - Constructor for class gui.matrixLibrary.ImportMatrixManager
 
index - Variable in class data.IndexedItem
Index (key) id
IndexedItem - Class in data
Basic class to work with array keys (indexes).
IndexedItem(int, float) - Constructor for class data.IndexedItem
 
IndexedItem(int, float, float) - Constructor for class data.IndexedItem
 
indexesOf(boolean[], boolean) - Static method in class utils.ArrayUtils
Return an array with the indexes of the given array that have the value given or null if nothing is found
indexesOf(int[], int) - Static method in class utils.ArrayUtils
Return an array with the indexes of the given array that have the value given or null if nothing is found
indexId - Variable in class data.TreeNode
Key or index of the contained item (taxa or test)
info - Variable in class data.Matrix
General Text info about matrix entered by user
info - Variable in class data.Workspace
The information about the workspace.
initPanel(JPanel, JTable, String) - Method in class gui.workSpace.PanelWSShowInfo
 
initTable(JTable) - Method in class gui.workSpace.PanelWSShowInfo
 
insertUpdate(DocumentEvent) - Method in class gui.matrixLibrary.PanelLibrary
 
insertUpdate(DocumentEvent) - Method in class gui.myWindows.PanelMatrixInfo
 
isCellEditable(int, int) - Method in class gui.myClasses.NonEditTableModel
 
isFinal() - Method in class data.TreeNode
Says if a TreeNode has no sons.
isFoundOnce - Variable in class gui.workSpace.PanelWSMain
 
isNumber(String) - Static method in class utils.DataUtils
Returns if the given String is composed only by numbers
isOverwriteRisk() - Method in class gui.matrixLibrary.DialogMatrixImport
 
isSeparator(int, int, int) - Method in class core.Identifier
Returns true if a given pair of taxa are separated one from the other by the specified test
isUTF8(InputStream) - Static method in class utils.TestEncoding
Detecta si el flujo de datos indicado es UTF-8.
itemStateChanged(ItemEvent) - Method in class gui.myClasses.CellEditorRadioButton
 

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