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Packages that use TreeNode | |
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core | |
data | |
data.exporters |
Uses of TreeNode in core |
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Fields in core declared as TreeNode | |
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TreeNode |
Tree.root
Root node of the tree |
Methods in core that return TreeNode | |
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private TreeNode |
Tree.recursiveTree(Context con)
Recursive method to populate tree |
Uses of TreeNode in data |
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Fields in data declared as TreeNode | |
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TreeNode |
TreeNode.negBrench
Pointer to the negative result brench |
TreeNode |
TreeNode.posBrench
Pointer to the positive result brench |
Uses of TreeNode in data.exporters |
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Methods in data.exporters with parameters of type TreeNode | |
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private static java.lang.String |
ExporterDOT.getNodeId(TreeNode tn)
Returns the Strign used to identify a node in tree. |
private static java.lang.String |
ExporterDOT.getNodeLine(TreeNode tn,
Matrix m,
boolean isTaxa)
Returns the String of a node line of the tree |
private static void |
ExporterDOT.writeDOT(TreeNode t,
Matrix mat,
java.io.OutputStreamWriter out)
Writes recursively all the tree nodes |
private static void |
ExporterTreeML.writeTreeML(TreeNode t,
int level,
Matrix mat,
java.io.OutputStreamWriter out)
Writes recursively all the tree nodes |
private static void |
ExporterXML.writeXML(TreeNode t,
int level,
Matrix mat,
java.io.OutputStreamWriter out)
Writes recursively all the tree nodes |
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